Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm25053-201ENSMUST00000103982 133 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm25922-201ENSMUST00000104281 130 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm11244-201ENSMUST00000121243 237 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm24679-201ENSMUST00000158762 111 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm25053-202ENSMUST00000199731 132 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cacna1aP97445 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.92□□□□□ -0.66
Cacna1aP97445 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm26875-201ENSMUST00000181006 950 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm37852-201ENSMUST00000193027 350 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm39288-201ENSMUST00000210554 446 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm30671-201ENSMUST00000214898 318 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm18968-201ENSMUST00000221319 862 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm5805-201ENSMUST00000072779 456 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 AC107763.1-201ENSMUST00000226082 1365 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cacna1aP97445 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cacna1aP97445 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.92□□□□□ -0.66
Cacna1aP97445 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.91□□□□□ -0.66
Cacna1aP97445 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.91□□□□□ -0.66
Cacna1aP97445 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
Cacna1aP97445 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.91□□□□□ -0.66
Cacna1aP97445 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.91□□□□□ -0.66
Cacna1aP97445 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cacna1aP97445 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cacna1aP97445 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.91□□□□□ -0.66
Cacna1aP97445 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.91□□□□□ -0.66
Cacna1aP97445 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cacna1aP97445 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.91□□□□□ -0.66
Cacna1aP97445 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Gm24943-201ENSMUST00000158329 433 ntBASIC10.91□□□□□ -0.66
Cacna1aP97445 Gm26134-201ENSMUST00000178484 110 ntBASIC10.91□□□□□ -0.66
Cacna1aP97445 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC10.91□□□□□ -0.66
Cacna1aP97445 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.91□□□□□ -0.66
Cacna1aP97445 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cacna1aP97445 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms