Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim43bP86448 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim43bP86448 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim43bP86448 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.16□□□□□ -0.46
Trim43bP86448 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trim43bP86448 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim43bP86448 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Gm14109-201ENSMUST00000118814 309 ntBASIC12.16□□□□□ -0.46
Trim43bP86448 Gm13315-201ENSMUST00000120376 991 ntBASIC12.16□□□□□ -0.46
Trim43bP86448 Gm13665-201ENSMUST00000120830 528 ntBASIC12.16□□□□□ -0.46
Trim43bP86448 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.16□□□□□ -0.46
Trim43bP86448 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Gm25043-201ENSMUST00000158604 212 ntBASIC12.16□□□□□ -0.46
Trim43bP86448 Gm17376-201ENSMUST00000166016 84 ntBASIC12.16□□□□□ -0.46
Trim43bP86448 Gm29199-201ENSMUST00000187766 775 ntBASIC12.16□□□□□ -0.46
Trim43bP86448 Gm38317-201ENSMUST00000195564 343 ntBASIC12.16□□□□□ -0.46
Trim43bP86448 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.16□□□□□ -0.46
Trim43bP86448 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trim43bP86448 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Trim43bP86448 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Trim43bP86448 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.16□□□□□ -0.46
Trim43bP86448 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Trim43bP86448 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim43bP86448 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim43bP86448 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43bP86448 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.15□□□□□ -0.46
Trim43bP86448 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.15□□□□□ -0.46
Trim43bP86448 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.15□□□□□ -0.46
Trim43bP86448 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Trim43bP86448 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trim43bP86448 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trim43bP86448 Gm23270-201ENSMUST00000104055 131 ntBASIC12.15□□□□□ -0.46
Trim43bP86448 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.15□□□□□ -0.46
Trim43bP86448 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim43bP86448 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim43bP86448 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim43bP86448 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.15□□□□□ -0.46
Trim43bP86448 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim43bP86448 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trim43bP86448 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim43bP86448 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.15□□□□□ -0.46
Trim43bP86448 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43bP86448 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.15□□□□□ -0.47
Trim43bP86448 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trim43bP86448 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Trim43bP86448 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim43bP86448 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim43bP86448 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim43bP86448 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43bP86448 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms