Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Rpl39P62892 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC8.38□□□□□ -1.07
Rpl39P62892 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Rpl39P62892 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Gm9115-201ENSMUST00000120192 1348 ntBASIC8.37□□□□□ -1.07
Rpl39P62892 Gm8793-201ENSMUST00000183069 1303 ntBASIC8.37□□□□□ -1.07
Rpl39P62892 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
Rpl39P62892 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC8.37□□□□□ -1.07
Rpl39P62892 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Rpl39P62892 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC8.37□□□□□ -1.07
Rpl39P62892 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC8.37□□□□□ -1.07
Rpl39P62892 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC8.37□□□□□ -1.07
Rpl39P62892 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC8.37□□□□□ -1.07
Rpl39P62892 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Gm11814-201ENSMUST00000119515 929 ntBASIC8.37□□□□□ -1.07
Rpl39P62892 Gm9431-201ENSMUST00000119765 1051 ntBASIC8.37□□□□□ -1.07
Rpl39P62892 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Gm5706-201ENSMUST00000181525 993 ntBASIC8.37□□□□□ -1.07
Rpl39P62892 Gm27023-201ENSMUST00000182372 285 ntBASIC8.37□□□□□ -1.07
Rpl39P62892 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Rpl39P62892 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Rpl39P62892 Gm18584-201ENSMUST00000203098 964 ntBASIC8.37□□□□□ -1.07
Rpl39P62892 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC8.37□□□□□ -1.07
Rpl39P62892 Gm9908-201ENSMUST00000211534 448 ntBASIC8.37□□□□□ -1.07
Rpl39P62892 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC8.37□□□□□ -1.07
Rpl39P62892 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Gm17794-201ENSMUST00000220252 955 ntBASIC8.37□□□□□ -1.07
Rpl39P62892 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Gm10268-201ENSMUST00000085340 555 ntBASIC8.37□□□□□ -1.07
Rpl39P62892 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Rpl39P62892 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC8.37□□□□□ -1.07
Rpl39P62892 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC8.37□□□□□ -1.07
Rpl39P62892 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Rpl39P62892 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Gm44207-201ENSMUST00000204568 1424 ntBASIC8.37□□□□□ -1.07
Rpl39P62892 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl39P62892 Gm18262-201ENSMUST00000222560 1946 ntBASIC8.37□□□□□ -1.07
Rpl39P62892 AC153506.1-201ENSMUST00000218768 2915 ntBASIC8.36□□□□□ -1.07
Rpl39P62892 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Rpl39P62892 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
Rpl39P62892 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Rpl39P62892 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Rpl39P62892 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC8.36□□□□□ -1.07
Rpl39P62892 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Rpl39P62892 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Rpl39P62892 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC8.36□□□□□ -1.07
Rpl39P62892 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Rpl39P62892 Gm11700-201ENSMUST00000119409 403 ntBASIC8.36□□□□□ -1.07
Rpl39P62892 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms