Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lsm5P62322 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Lsm5P62322 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC9.79□□□□□ -0.84
Lsm5P62322 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Lsm5P62322 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lsm5P62322 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.78□□□□□ -0.84
Lsm5P62322 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Lsm5P62322 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Lsm5P62322 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.78□□□□□ -0.84
Lsm5P62322 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Lsm5P62322 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Lsm5P62322 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.78□□□□□ -0.84
Lsm5P62322 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Gm12314-201ENSMUST00000118104 538 ntBASIC9.78□□□□□ -0.84
Lsm5P62322 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Gm11803-201ENSMUST00000119966 444 ntBASIC9.78□□□□□ -0.84
Lsm5P62322 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.78□□□□□ -0.84
Lsm5P62322 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC9.78□□□□□ -0.84
Lsm5P62322 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC9.78□□□□□ -0.84
Lsm5P62322 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC9.78□□□□□ -0.84
Lsm5P62322 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Lsm5P62322 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Lsm5P62322 Gm22058-201ENSMUST00000083393 310 ntBASIC9.78□□□□□ -0.84
Lsm5P62322 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC9.78□□□□□ -0.84
Lsm5P62322 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.78□□□□□ -0.84
Lsm5P62322 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Lsm5P62322 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Lsm5P62322 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.78□□□□□ -0.84
Lsm5P62322 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Lsm5P62322 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Lsm5P62322 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm5P62322 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Lsm5P62322 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lsm5P62322 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Lsm5P62322 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Lsm5P62322 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Lsm5P62322 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Lsm5P62322 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.77□□□□□ -0.85
Lsm5P62322 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
Lsm5P62322 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Lsm5P62322 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC9.77□□□□□ -0.85
Lsm5P62322 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Lsm5P62322 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 Gm5703-201ENSMUST00000186658 3973 ntBASIC9.77□□□□□ -0.85
Lsm5P62322 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.77□□□□□ -0.85
Lsm5P62322 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC9.77□□□□□ -0.85
Lsm5P62322 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC9.77□□□□□ -0.85
Lsm5P62322 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Lsm5P62322 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Lsm5P62322 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Lsm5P62322 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm5P62322 Gm5904-201ENSMUST00000210286 865 ntBASIC9.77□□□□□ -0.85
Lsm5P62322 Gm807-202ENSMUST00000224929 408 ntBASIC9.77□□□□□ -0.85
Lsm5P62322 AC155252.1-201ENSMUST00000226462 1208 ntBASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms