Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm44814-201ENSMUST00000207018 434 ntBASIC17.85■□□□□ 0.45
Cux1P53564 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cux1P53564 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC17.85■□□□□ 0.45
Cux1P53564 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Cux1P53564 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Cux1P53564 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Cux1P53564 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.84■□□□□ 0.45
Cux1P53564 Gm15617-201ENSMUST00000118973 771 ntBASIC17.84■□□□□ 0.45
Cux1P53564 Gm15196-201ENSMUST00000121406 482 ntBASIC17.84■□□□□ 0.45
Cux1P53564 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC17.84■□□□□ 0.45
Cux1P53564 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC17.84■□□□□ 0.45
Cux1P53564 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Gm9162-201ENSMUST00000182081 991 ntBASIC17.84■□□□□ 0.45
Cux1P53564 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC17.84■□□□□ 0.45
Cux1P53564 Gm6423-201ENSMUST00000204315 934 ntBASIC17.84■□□□□ 0.45
Cux1P53564 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC17.84■□□□□ 0.45
Cux1P53564 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC17.84■□□□□ 0.45
Cux1P53564 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cux1P53564 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
Cux1P53564 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Cux1P53564 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC17.84■□□□□ 0.45
Cux1P53564 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC17.84■□□□□ 0.45
Cux1P53564 Gm37651-201ENSMUST00000194679 1494 ntBASIC17.84■□□□□ 0.45
Cux1P53564 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cux1P53564 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cux1P53564 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cux1P53564 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cux1P53564 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cux1P53564 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Cux1P53564 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cux1P53564 Gm9507-202ENSMUST00000180157 654 ntBASIC17.83■□□□□ 0.45
Cux1P53564 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cux1P53564 Gm31274-201ENSMUST00000197356 229 ntBASIC17.83■□□□□ 0.45
Cux1P53564 Gm43506-201ENSMUST00000200675 753 ntBASIC17.83■□□□□ 0.45
Cux1P53564 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cux1P53564 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.83■□□□□ 0.45
Cux1P53564 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
Cux1P53564 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cux1P53564 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cux1P53564 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC17.83■□□□□ 0.45
Cux1P53564 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cux1P53564 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cux1P53564 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cux1P53564 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cux1P53564 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cux1P53564 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cux1P53564 Gm44106-201ENSMUST00000203153 1599 ntBASIC17.83■□□□□ 0.44
Cux1P53564 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cux1P53564 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cux1P53564 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cux1P53564 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cux1P53564 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cux1P53564 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC17.83■□□□□ 0.44
Cux1P53564 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cux1P53564 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cux1P53564 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cux1P53564 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cux1P53564 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cux1P53564 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cux1P53564 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cux1P53564 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cux1P53564 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cux1P53564 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC17.82■□□□□ 0.44
Cux1P53564 Gm9916-201ENSMUST00000192943 1228 ntBASIC17.82■□□□□ 0.44
Cux1P53564 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC17.82■□□□□ 0.44
Cux1P53564 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC17.82■□□□□ 0.44
Cux1P53564 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cux1P53564 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cux1P53564 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cux1P53564 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cux1P53564 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cux1P53564 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cux1P53564 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cux1P53564 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cux1P53564 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cux1P53564 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cux1P53564 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cux1P53564 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms