Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SqleP52019 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SqleP52019 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.8□□□□□ -0.36
SqleP52019 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SqleP52019 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.8□□□□□ -0.36
SqleP52019 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.8□□□□□ -0.36
SqleP52019 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.8□□□□□ -0.36
SqleP52019 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.8□□□□□ -0.36
SqleP52019 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.8□□□□□ -0.36
SqleP52019 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.8□□□□□ -0.36
SqleP52019 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SqleP52019 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SqleP52019 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.8□□□□□ -0.36
SqleP52019 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SqleP52019 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SqleP52019 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
SqleP52019 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SqleP52019 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SqleP52019 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Gm12247-201ENSMUST00000117585 670 ntBASIC12.79□□□□□ -0.36
SqleP52019 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Gm16219-201ENSMUST00000120096 274 ntBASIC12.79□□□□□ -0.36
SqleP52019 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.79□□□□□ -0.36
SqleP52019 Mir6953-201ENSMUST00000184745 68 ntBASIC12.79□□□□□ -0.36
SqleP52019 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Gm37197-201ENSMUST00000195607 401 ntBASIC12.79□□□□□ -0.36
SqleP52019 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.79□□□□□ -0.36
SqleP52019 BC080696-201ENSMUST00000202858 1218 ntBASIC12.79□□□□□ -0.36
SqleP52019 Gm2594-201ENSMUST00000214774 742 ntBASIC12.79□□□□□ -0.36
SqleP52019 Mir326-201ENSMUST00000083637 95 ntBASIC12.79□□□□□ -0.36
SqleP52019 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SqleP52019 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.79□□□□□ -0.36
SqleP52019 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.79□□□□□ -0.36
SqleP52019 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.79□□□□□ -0.36
SqleP52019 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.79□□□□□ -0.36
SqleP52019 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SqleP52019 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SqleP52019 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SqleP52019 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SqleP52019 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SqleP52019 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.78□□□□□ -0.36
SqleP52019 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
SqleP52019 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SqleP52019 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SqleP52019 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SqleP52019 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SqleP52019 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SqleP52019 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SqleP52019 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SqleP52019 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SqleP52019 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SqleP52019 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SqleP52019 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms