Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SftpbP50405 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
SftpbP50405 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SftpbP50405 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.04□□□□□ -0.48
SftpbP50405 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SftpbP50405 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SftpbP50405 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.04□□□□□ -0.48
SftpbP50405 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.03□□□□□ -0.48
SftpbP50405 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.03□□□□□ -0.48
SftpbP50405 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.03□□□□□ -0.48
SftpbP50405 Gm12957-201ENSMUST00000117835 377 ntBASIC12.03□□□□□ -0.48
SftpbP50405 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.03□□□□□ -0.48
SftpbP50405 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SftpbP50405 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.03□□□□□ -0.48
SftpbP50405 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.03□□□□□ -0.48
SftpbP50405 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Gm18054-201ENSMUST00000207539 555 ntBASIC12.03□□□□□ -0.48
SftpbP50405 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SftpbP50405 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SftpbP50405 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SftpbP50405 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
SftpbP50405 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SftpbP50405 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.03□□□□□ -0.48
SftpbP50405 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SftpbP50405 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.03□□□□□ -0.48
SftpbP50405 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpbP50405 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SftpbP50405 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SftpbP50405 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.02□□□□□ -0.48
SftpbP50405 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.48
SftpbP50405 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.02□□□□□ -0.48
SftpbP50405 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
SftpbP50405 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SftpbP50405 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SftpbP50405 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SftpbP50405 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
SftpbP50405 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SftpbP50405 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SftpbP50405 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SftpbP50405 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.02□□□□□ -0.48
SftpbP50405 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
SftpbP50405 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SftpbP50405 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SftpbP50405 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SftpbP50405 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SftpbP50405 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.02□□□□□ -0.49
SftpbP50405 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SftpbP50405 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.02□□□□□ -0.49
SftpbP50405 Gm11700-201ENSMUST00000119409 403 ntBASIC12.02□□□□□ -0.49
SftpbP50405 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.02□□□□□ -0.49
SftpbP50405 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.02□□□□□ -0.49
SftpbP50405 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SftpbP50405 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SftpbP50405 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SftpbP50405 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SftpbP50405 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SftpbP50405 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.02□□□□□ -0.49
SftpbP50405 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SftpbP50405 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SftpbP50405 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SftpbP50405 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SftpbP50405 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SftpbP50405 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SftpbP50405 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SftpbP50405 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SftpbP50405 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SftpbP50405 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms