Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm9996-201ENSMUST00000070359 913 ntBASIC11.03□□□□□ -0.64
Sox2P48432 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox2P48432 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Sox2P48432 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox2P48432 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.03□□□□□ -0.64
Sox2P48432 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox2P48432 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Sox2P48432 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox2P48432 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox2P48432 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sox2P48432 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sox2P48432 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox2P48432 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.02□□□□□ -0.64
Sox2P48432 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox2P48432 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox2P48432 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox2P48432 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox2P48432 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox2P48432 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox2P48432 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.02□□□□□ -0.64
Sox2P48432 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox2P48432 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Sox2P48432 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox2P48432 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sox2P48432 Gm12164-201ENSMUST00000121695 551 ntBASIC11.02□□□□□ -0.65
Sox2P48432 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.02□□□□□ -0.65
Sox2P48432 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.02□□□□□ -0.65
Sox2P48432 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.02□□□□□ -0.65
Sox2P48432 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Sox2P48432 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox2P48432 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox2P48432 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox2P48432 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Sox2P48432 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sox2P48432 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Sox2P48432 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.02□□□□□ -0.65
Sox2P48432 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox2P48432 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox2P48432 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox2P48432 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Gm12390-201ENSMUST00000117897 397 ntBASIC11.01□□□□□ -0.65
Sox2P48432 Gm11439-201ENSMUST00000118598 409 ntBASIC11.01□□□□□ -0.65
Sox2P48432 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox2P48432 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.01□□□□□ -0.65
Sox2P48432 Gm24845-201ENSMUST00000158034 109 ntBASIC11.01□□□□□ -0.65
Sox2P48432 Gm25043-201ENSMUST00000158604 212 ntBASIC11.01□□□□□ -0.65
Sox2P48432 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox2P48432 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.01□□□□□ -0.65
Sox2P48432 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox2P48432 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox2P48432 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Sox2P48432 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms