Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Gli1P47806 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.55□□□□□ -0.56
Gli1P47806 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Gli1P47806 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.55□□□□□ -0.56
Gli1P47806 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.55□□□□□ -0.56
Gli1P47806 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.54□□□□□ -0.56
Gli1P47806 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gli1P47806 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.54□□□□□ -0.56
Gli1P47806 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Gli1P47806 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Gli1P47806 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.54□□□□□ -0.56
Gli1P47806 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Gli1P47806 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.54□□□□□ -0.56
Gli1P47806 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
Gli1P47806 Gm7857-201ENSMUST00000117957 358 ntBASIC11.54□□□□□ -0.56
Gli1P47806 Gm12314-201ENSMUST00000118104 538 ntBASIC11.54□□□□□ -0.56
Gli1P47806 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.54□□□□□ -0.56
Gli1P47806 Gm13665-201ENSMUST00000120830 528 ntBASIC11.54□□□□□ -0.56
Gli1P47806 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.54□□□□□ -0.56
Gli1P47806 Gm26361-201ENSMUST00000158868 186 ntBASIC11.54□□□□□ -0.56
Gli1P47806 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Gm24514-201ENSMUST00000174961 285 ntBASIC11.54□□□□□ -0.56
Gli1P47806 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.54□□□□□ -0.56
Gli1P47806 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.54□□□□□ -0.56
Gli1P47806 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.54□□□□□ -0.56
Gli1P47806 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.54□□□□□ -0.56
Gli1P47806 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.54□□□□□ -0.56
Gli1P47806 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.54□□□□□ -0.56
Gli1P47806 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.54□□□□□ -0.56
Gli1P47806 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.54□□□□□ -0.56
Gli1P47806 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.54□□□□□ -0.56
Gli1P47806 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Gli1P47806 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gli1P47806 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Gli1P47806 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Gli1P47806 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.53□□□□□ -0.56
Gli1P47806 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Gm25214-201ENSMUST00000104573 129 ntBASIC11.53□□□□□ -0.56
Gli1P47806 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.53□□□□□ -0.56
Gli1P47806 Gm14208-201ENSMUST00000119645 678 ntBASIC11.53□□□□□ -0.56
Gli1P47806 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.53□□□□□ -0.56
Gli1P47806 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.53□□□□□ -0.56
Gli1P47806 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.53□□□□□ -0.56
Gli1P47806 Gm27023-201ENSMUST00000182372 285 ntBASIC11.53□□□□□ -0.56
Gli1P47806 Gm28450-201ENSMUST00000187349 638 ntBASIC11.53□□□□□ -0.56
Gli1P47806 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Gm44262-201ENSMUST00000204969 372 ntBASIC11.53□□□□□ -0.56
Gli1P47806 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gli1P47806 Gm8959-201ENSMUST00000213150 571 ntBASIC11.53□□□□□ -0.56
Gli1P47806 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms