Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd9P40240 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.63□□□□□ -0.55
Cd9P40240 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd9P40240 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.63□□□□□ -0.55
Cd9P40240 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Cd9P40240 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.63□□□□□ -0.55
Cd9P40240 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd9P40240 Gm12196-201ENSMUST00000120954 262 ntBASIC11.63□□□□□ -0.55
Cd9P40240 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd9P40240 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.63□□□□□ -0.55
Cd9P40240 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd9P40240 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.63□□□□□ -0.55
Cd9P40240 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.63□□□□□ -0.55
Cd9P40240 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.63□□□□□ -0.55
Cd9P40240 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd9P40240 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd9P40240 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.63□□□□□ -0.55
Cd9P40240 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd9P40240 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.63□□□□□ -0.55
Cd9P40240 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Cd9P40240 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd9P40240 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd9P40240 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd9P40240 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd9P40240 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd9P40240 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.63□□□□□ -0.55
Cd9P40240 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd9P40240 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cd9P40240 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.62□□□□□ -0.55
Cd9P40240 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cd9P40240 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.62□□□□□ -0.55
Cd9P40240 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.62□□□□□ -0.55
Cd9P40240 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Cd9P40240 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.62□□□□□ -0.55
Cd9P40240 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.62□□□□□ -0.55
Cd9P40240 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.62□□□□□ -0.55
Cd9P40240 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cd9P40240 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.62□□□□□ -0.55
Cd9P40240 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cd9P40240 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.62□□□□□ -0.55
Cd9P40240 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.62□□□□□ -0.55
Cd9P40240 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd9P40240 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cd9P40240 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.61□□□□□ -0.55
Cd9P40240 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.61□□□□□ -0.55
Cd9P40240 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.61□□□□□ -0.55
Cd9P40240 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.61□□□□□ -0.55
Cd9P40240 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cd9P40240 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cd9P40240 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.61□□□□□ -0.55
Cd9P40240 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd9P40240 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.61□□□□□ -0.55
Cd9P40240 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Cd9P40240 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms