Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.43□□□□□ -0.42
Rfc1P35601 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.43□□□□□ -0.42
Rfc1P35601 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.43□□□□□ -0.42
Rfc1P35601 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rfc1P35601 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rfc1P35601 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Rfc1P35601 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rfc1P35601 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.42□□□□□ -0.42
Rfc1P35601 Gm19165-201ENSMUST00000204453 1982 ntBASIC12.42□□□□□ -0.42
Rfc1P35601 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Gm12390-201ENSMUST00000117897 397 ntBASIC12.42□□□□□ -0.42
Rfc1P35601 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.42□□□□□ -0.42
Rfc1P35601 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Gm27682-201ENSMUST00000183930 110 ntBASIC12.42□□□□□ -0.42
Rfc1P35601 Gm27243-201ENSMUST00000183964 521 ntBASIC12.42□□□□□ -0.42
Rfc1P35601 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.42□□□□□ -0.42
Rfc1P35601 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.42□□□□□ -0.42
Rfc1P35601 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.42□□□□□ -0.42
Rfc1P35601 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rfc1P35601 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rfc1P35601 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.42□□□□□ -0.42
Rfc1P35601 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.42□□□□□ -0.42
Rfc1P35601 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rfc1P35601 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rfc1P35601 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rfc1P35601 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfc1P35601 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Rfc1P35601 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfc1P35601 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfc1P35601 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfc1P35601 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rfc1P35601 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Rfc1P35601 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Rfc1P35601 Gm11964-201ENSMUST00000120982 444 ntBASIC12.41□□□□□ -0.42
Rfc1P35601 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.41□□□□□ -0.42
Rfc1P35601 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfc1P35601 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.41□□□□□ -0.42
Rfc1P35601 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfc1P35601 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfc1P35601 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfc1P35601 Gm4034-201ENSMUST00000187674 480 ntBASIC12.41□□□□□ -0.42
Rfc1P35601 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Rfc1P35601 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.41□□□□□ -0.42
Rfc1P35601 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfc1P35601 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rfc1P35601 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.41□□□□□ -0.42
Rfc1P35601 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Rfc1P35601 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.41□□□□□ -0.42
Rfc1P35601 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfc1P35601 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfc1P35601 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rfc1P35601 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfc1P35601 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rfc1P35601 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfc1P35601 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.41□□□□□ -0.42
Rfc1P35601 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfc1P35601 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rfc1P35601 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfc1P35601 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfc1P35601 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfc1P35601 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfc1P35601 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfc1P35601 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfc1P35601 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms