Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.78□□□□□ -0.52
Nckap1P28660 Gm22920-201ENSMUST00000102175 109 ntBASIC11.78□□□□□ -0.52
Nckap1P28660 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nckap1P28660 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.78□□□□□ -0.52
Nckap1P28660 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nckap1P28660 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Nckap1P28660 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.78□□□□□ -0.52
Nckap1P28660 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.78□□□□□ -0.52
Nckap1P28660 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.78□□□□□ -0.52
Nckap1P28660 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nckap1P28660 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nckap1P28660 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.78□□□□□ -0.52
Nckap1P28660 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nckap1P28660 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.78□□□□□ -0.52
Nckap1P28660 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.78□□□□□ -0.52
Nckap1P28660 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nckap1P28660 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Nckap1P28660 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nckap1P28660 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Nckap1P28660 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Nckap1P28660 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.52
Nckap1P28660 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nckap1P28660 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nckap1P28660 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nckap1P28660 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nckap1P28660 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.77□□□□□ -0.53
Nckap1P28660 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Nckap1P28660 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Nckap1P28660 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Gm8731-201ENSMUST00000118088 412 ntBASIC11.77□□□□□ -0.53
Nckap1P28660 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Gm43852-201ENSMUST00000202098 917 ntBASIC11.77□□□□□ -0.53
Nckap1P28660 Gm45219-201ENSMUST00000205602 465 ntBASIC11.77□□□□□ -0.53
Nckap1P28660 Gm9463-201ENSMUST00000206707 601 ntBASIC11.77□□□□□ -0.53
Nckap1P28660 Gm6108-201ENSMUST00000208365 367 ntBASIC11.77□□□□□ -0.53
Nckap1P28660 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Nckap1P28660 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.77□□□□□ -0.53
Nckap1P28660 Gm2517-201ENSMUST00000215651 348 ntBASIC11.77□□□□□ -0.53
Nckap1P28660 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Nckap1P28660 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.77□□□□□ -0.53
Nckap1P28660 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nckap1P28660 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.77□□□□□ -0.53
Nckap1P28660 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Nckap1P28660 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Nckap1P28660 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.77□□□□□ -0.53
Nckap1P28660 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nckap1P28660 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nckap1P28660 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.76□□□□□ -0.53
Nckap1P28660 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.76□□□□□ -0.53
Nckap1P28660 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nckap1P28660 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.76□□□□□ -0.53
Nckap1P28660 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nckap1P28660 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nckap1P28660 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Nckap1P28660 Gm12579-201ENSMUST00000118040 783 ntBASIC11.76□□□□□ -0.53
Nckap1P28660 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms