Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
H2afxP27661 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
H2afxP27661 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
H2afxP27661 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.26□□□□□ -0.45
H2afxP27661 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.26□□□□□ -0.45
H2afxP27661 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.26□□□□□ -0.45
H2afxP27661 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.26□□□□□ -0.45
H2afxP27661 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.26□□□□□ -0.45
H2afxP27661 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.26□□□□□ -0.45
H2afxP27661 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.26□□□□□ -0.45
H2afxP27661 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.26□□□□□ -0.45
H2afxP27661 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
H2afxP27661 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
H2afxP27661 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
H2afxP27661 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
H2afxP27661 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
H2afxP27661 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.26□□□□□ -0.45
H2afxP27661 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
H2afxP27661 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afxP27661 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
H2afxP27661 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
H2afxP27661 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
H2afxP27661 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
H2afxP27661 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.25□□□□□ -0.45
H2afxP27661 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Gm12928-201ENSMUST00000117115 573 ntBASIC12.25□□□□□ -0.45
H2afxP27661 Gm13736-201ENSMUST00000119272 253 ntBASIC12.25□□□□□ -0.45
H2afxP27661 Gm13612-201ENSMUST00000119276 390 ntBASIC12.25□□□□□ -0.45
H2afxP27661 Gm13342-201ENSMUST00000121055 207 ntBASIC12.25□□□□□ -0.45
H2afxP27661 Gm14719-201ENSMUST00000121891 340 ntBASIC12.25□□□□□ -0.45
H2afxP27661 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.25□□□□□ -0.45
H2afxP27661 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
H2afxP27661 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
H2afxP27661 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Gm5370-201ENSMUST00000187187 574 ntBASIC12.25□□□□□ -0.45
H2afxP27661 Gm44771-201ENSMUST00000206975 626 ntBASIC12.25□□□□□ -0.45
H2afxP27661 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.25□□□□□ -0.45
H2afxP27661 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Gm10146-201ENSMUST00000072739 309 ntBASIC12.25□□□□□ -0.45
H2afxP27661 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.25□□□□□ -0.45
H2afxP27661 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.25□□□□□ -0.45
H2afxP27661 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
H2afxP27661 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.25□□□□□ -0.45
H2afxP27661 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afxP27661 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms