Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.94□□□□□ -0.34
Pde6bP23440 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pde6bP23440 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Pde6bP23440 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Pde6bP23440 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.94□□□□□ -0.34
Pde6bP23440 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Gm13263-201ENSMUST00000121271 838 ntBASIC12.94□□□□□ -0.34
Pde6bP23440 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Gm4726-201ENSMUST00000135604 736 ntBASIC12.94□□□□□ -0.34
Pde6bP23440 Gm6019-201ENSMUST00000148369 736 ntBASIC12.94□□□□□ -0.34
Pde6bP23440 Gm22144-201ENSMUST00000157402 102 ntBASIC12.94□□□□□ -0.34
Pde6bP23440 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.94□□□□□ -0.34
Pde6bP23440 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Pde6bP23440 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.94□□□□□ -0.34
Pde6bP23440 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.94□□□□□ -0.34
Pde6bP23440 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.94□□□□□ -0.34
Pde6bP23440 Gm8365-201ENSMUST00000197334 648 ntBASIC12.94□□□□□ -0.34
Pde6bP23440 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Pde6bP23440 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pde6bP23440 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pde6bP23440 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6bP23440 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pde6bP23440 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Pde6bP23440 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Pde6bP23440 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.93□□□□□ -0.34
Pde6bP23440 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.93□□□□□ -0.34
Pde6bP23440 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Pde6bP23440 Gm11956-201ENSMUST00000119525 512 ntBASIC12.93□□□□□ -0.34
Pde6bP23440 Gm7666-201ENSMUST00000146631 819 ntBASIC12.93□□□□□ -0.34
Pde6bP23440 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.93□□□□□ -0.34
Pde6bP23440 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.93□□□□□ -0.34
Pde6bP23440 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.93□□□□□ -0.34
Pde6bP23440 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.93□□□□□ -0.34
Pde6bP23440 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.93□□□□□ -0.34
Pde6bP23440 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.93□□□□□ -0.34
Pde6bP23440 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pde6bP23440 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pde6bP23440 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pde6bP23440 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.92□□□□□ -0.34
Pde6bP23440 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.92□□□□□ -0.34
Pde6bP23440 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pde6bP23440 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms