Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Clk1P22518 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Clk1P22518 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.11□□□□□ -0.63
Clk1P22518 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Clk1P22518 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Gm14644-201ENSMUST00000116671 647 ntBASIC11.11□□□□□ -0.63
Clk1P22518 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.11□□□□□ -0.63
Clk1P22518 Gm24845-201ENSMUST00000158034 109 ntBASIC11.11□□□□□ -0.63
Clk1P22518 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.11□□□□□ -0.63
Clk1P22518 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.11□□□□□ -0.63
Clk1P22518 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Clk1P22518 Gm2991-201ENSMUST00000173338 480 ntBASIC11.11□□□□□ -0.63
Clk1P22518 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.11□□□□□ -0.63
Clk1P22518 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Gm45865-201ENSMUST00000211815 945 ntBASIC11.11□□□□□ -0.63
Clk1P22518 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.11□□□□□ -0.63
Clk1P22518 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.11□□□□□ -0.63
Clk1P22518 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.11□□□□□ -0.63
Clk1P22518 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.11□□□□□ -0.63
Clk1P22518 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.11□□□□□ -0.63
Clk1P22518 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.11□□□□□ -0.63
Clk1P22518 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.11□□□□□ -0.63
Clk1P22518 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.11□□□□□ -0.63
Clk1P22518 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.11□□□□□ -0.63
Clk1P22518 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.11□□□□□ -0.63
Clk1P22518 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Clk1P22518 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.11□□□□□ -0.63
Clk1P22518 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Clk1P22518 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Clk1P22518 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Clk1P22518 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clk1P22518 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Clk1P22518 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Clk1P22518 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.1□□□□□ -0.63
Clk1P22518 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Clk1P22518 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Clk1P22518 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Clk1P22518 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.1□□□□□ -0.63
Clk1P22518 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.1□□□□□ -0.63
Clk1P22518 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.1□□□□□ -0.63
Clk1P22518 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Gm9230-201ENSMUST00000188228 532 ntBASIC11.1□□□□□ -0.63
Clk1P22518 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.1□□□□□ -0.63
Clk1P22518 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.1□□□□□ -0.63
Clk1P22518 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.1□□□□□ -0.63
Clk1P22518 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Clk1P22518 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms