Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
VimP20152 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.93□□□□□ -0.5
VimP20152 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
VimP20152 Gm23912-201ENSMUST00000104687 87 ntBASIC11.93□□□□□ -0.5
VimP20152 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.93□□□□□ -0.5
VimP20152 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.93□□□□□ -0.5
VimP20152 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.93□□□□□ -0.5
VimP20152 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.93□□□□□ -0.5
VimP20152 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
VimP20152 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.92□□□□□ -0.5
VimP20152 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.92□□□□□ -0.5
VimP20152 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.92□□□□□ -0.5
VimP20152 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.92□□□□□ -0.5
VimP20152 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
VimP20152 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.92□□□□□ -0.5
VimP20152 Gm15321-201ENSMUST00000121290 288 ntBASIC11.92□□□□□ -0.5
VimP20152 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.92□□□□□ -0.5
VimP20152 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.92□□□□□ -0.5
VimP20152 Mir7654-201ENSMUST00000185082 70 ntBASIC11.92□□□□□ -0.5
VimP20152 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.92□□□□□ -0.5
VimP20152 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.92□□□□□ -0.5
VimP20152 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
VimP20152 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.92□□□□□ -0.5
VimP20152 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
VimP20152 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
VimP20152 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VimP20152 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.91□□□□□ -0.5
VimP20152 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
VimP20152 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VimP20152 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VimP20152 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
VimP20152 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VimP20152 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VimP20152 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
VimP20152 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
VimP20152 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
VimP20152 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
VimP20152 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VimP20152 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
VimP20152 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VimP20152 Gm13492-201ENSMUST00000119772 665 ntBASIC11.91□□□□□ -0.5
VimP20152 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.91□□□□□ -0.5
VimP20152 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VimP20152 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.91□□□□□ -0.5
VimP20152 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.91□□□□□ -0.5
VimP20152 Gm42693-201ENSMUST00000196779 631 ntBASIC11.91□□□□□ -0.5
VimP20152 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.91□□□□□ -0.5
VimP20152 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VimP20152 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.91□□□□□ -0.5
VimP20152 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VimP20152 Gm10254-201ENSMUST00000052888 867 ntBASIC11.91□□□□□ -0.5
VimP20152 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VimP20152 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VimP20152 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
VimP20152 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VimP20152 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
VimP20152 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms