Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccl3P10855 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ccl3P10855 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.39□□□□□ -0.75
Ccl3P10855 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.39□□□□□ -0.75
Ccl3P10855 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ccl3P10855 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ccl3P10855 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccl3P10855 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccl3P10855 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.39□□□□□ -0.75
Ccl3P10855 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.39□□□□□ -0.75
Ccl3P10855 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Gm44124-201ENSMUST00000204159 472 ntBASIC10.39□□□□□ -0.75
Ccl3P10855 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccl3P10855 Gm17825-201ENSMUST00000206836 794 ntBASIC10.39□□□□□ -0.75
Ccl3P10855 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.39□□□□□ -0.75
Ccl3P10855 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.39□□□□□ -0.75
Ccl3P10855 Gm5996-201ENSMUST00000211110 718 ntBASIC10.39□□□□□ -0.75
Ccl3P10855 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.39□□□□□ -0.75
Ccl3P10855 Gm4604-201ENSMUST00000025040 390 ntBASIC10.39□□□□□ -0.75
Ccl3P10855 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Gm10263-201ENSMUST00000085163 300 ntBASIC10.39□□□□□ -0.75
Ccl3P10855 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ccl3P10855 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.39□□□□□ -0.75
Ccl3P10855 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccl3P10855 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccl3P10855 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.39□□□□□ -0.75
Ccl3P10855 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccl3P10855 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.38□□□□□ -0.75
Ccl3P10855 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.38□□□□□ -0.75
Ccl3P10855 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Gm14270-201ENSMUST00000118388 846 ntBASIC10.38□□□□□ -0.75
Ccl3P10855 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccl3P10855 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccl3P10855 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccl3P10855 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccl3P10855 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.38□□□□□ -0.75
Ccl3P10855 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Ccl3P10855 Gm30671-201ENSMUST00000214898 318 ntBASIC10.38□□□□□ -0.75
Ccl3P10855 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccl3P10855 Gm18514-201ENSMUST00000218980 436 ntBASIC10.38□□□□□ -0.75
Ccl3P10855 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.38□□□□□ -0.75
Ccl3P10855 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.38□□□□□ -0.75
Ccl3P10855 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Gm16380-201ENSMUST00000077997 478 ntBASIC10.38□□□□□ -0.75
Ccl3P10855 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Ccl3P10855 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Ccl3P10855 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.38□□□□□ -0.75
Ccl3P10855 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccl3P10855 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Ccl3P10855 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ccl3P10855 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Ccl3P10855 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Ccl3P10855 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.38□□□□□ -0.75
Ccl3P10855 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl3P10855 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.37□□□□□ -0.75
Ccl3P10855 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms