Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Ccl1P10146 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.11□□□□□ -0.95
Ccl1P10146 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.11□□□□□ -0.95
Ccl1P10146 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccl1P10146 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.11□□□□□ -0.95
Ccl1P10146 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.11□□□□□ -0.95
Ccl1P10146 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.11□□□□□ -0.95
Ccl1P10146 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccl1P10146 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccl1P10146 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ccl1P10146 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccl1P10146 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccl1P10146 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Ccl1P10146 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccl1P10146 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccl1P10146 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccl1P10146 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Ccl1P10146 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccl1P10146 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.11□□□□□ -0.95
Ccl1P10146 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.1□□□□□ -0.95
Ccl1P10146 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Ccl1P10146 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Ccl1P10146 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.1□□□□□ -0.95
Ccl1P10146 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.1□□□□□ -0.95
Ccl1P10146 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Ccl1P10146 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Gm12314-201ENSMUST00000118104 538 ntBASIC9.1□□□□□ -0.95
Ccl1P10146 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Ccl1P10146 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.1□□□□□ -0.95
Ccl1P10146 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Gm8810-201ENSMUST00000172895 754 ntBASIC9.1□□□□□ -0.95
Ccl1P10146 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC9.1□□□□□ -0.95
Ccl1P10146 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Ccl1P10146 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Ccl1P10146 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Ccl1P10146 Gm37917-201ENSMUST00000194711 392 ntBASIC9.1□□□□□ -0.95
Ccl1P10146 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC9.1□□□□□ -0.95
Ccl1P10146 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.1□□□□□ -0.95
Ccl1P10146 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC9.1□□□□□ -0.95
Ccl1P10146 Gm18624-201ENSMUST00000220966 658 ntBASIC9.1□□□□□ -0.95
Ccl1P10146 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Ccl1P10146 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.1□□□□□ -0.95
Ccl1P10146 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
Ccl1P10146 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Ccl1P10146 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.1□□□□□ -0.95
Ccl1P10146 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccl1P10146 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Ccl1P10146 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.09□□□□□ -0.95
Ccl1P10146 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ccl1P10146 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Ccl1P10146 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Ccl1P10146 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Ccl1P10146 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ccl1P10146 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC9.09□□□□□ -0.95
Ccl1P10146 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.09□□□□□ -0.95
Ccl1P10146 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl1P10146 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms