Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.3□□□□□ -0.76
PtcraP0C6B2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.3□□□□□ -0.76
PtcraP0C6B2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.3□□□□□ -0.76
PtcraP0C6B2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PtcraP0C6B2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm23596-201ENSMUST00000104304 132 ntBASIC10.29□□□□□ -0.76
PtcraP0C6B2 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm11509-201ENSMUST00000117358 325 ntBASIC10.29□□□□□ -0.76
PtcraP0C6B2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm26047-201ENSMUST00000157308 113 ntBASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm4310-201ENSMUST00000177847 889 ntBASIC10.29□□□□□ -0.76
PtcraP0C6B2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm16505-201ENSMUST00000179981 232 ntBASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm3332-201ENSMUST00000189337 928 ntBASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm26047-202ENSMUST00000198840 115 ntBASIC10.29□□□□□ -0.76
PtcraP0C6B2 Rps4l-202ENSMUST00000204242 789 ntBASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm9797-202ENSMUST00000218003 294 ntBASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm18730-201ENSMUST00000218038 343 ntBASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.29□□□□□ -0.76
PtcraP0C6B2 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.29□□□□□ -0.76
PtcraP0C6B2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PtcraP0C6B2 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.28□□□□□ -0.76
PtcraP0C6B2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PtcraP0C6B2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
PtcraP0C6B2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.28□□□□□ -0.76
PtcraP0C6B2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
PtcraP0C6B2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PtcraP0C6B2 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.28□□□□□ -0.76
PtcraP0C6B2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
PtcraP0C6B2 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.28□□□□□ -0.76
PtcraP0C6B2 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.28□□□□□ -0.76
PtcraP0C6B2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
PtcraP0C6B2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PtcraP0C6B2 Gm12857-201ENSMUST00000117678 592 ntBASIC10.28□□□□□ -0.76
PtcraP0C6B2 Gm15711-201ENSMUST00000118889 535 ntBASIC10.28□□□□□ -0.76
PtcraP0C6B2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
PtcraP0C6B2 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
PtcraP0C6B2 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PtcraP0C6B2 Gm21156-201ENSMUST00000189693 869 ntBASIC10.28□□□□□ -0.76
PtcraP0C6B2 Gm2965-201ENSMUST00000198365 343 ntBASIC10.28□□□□□ -0.76
PtcraP0C6B2 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms