Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.06□□□□□ -0.48
Rc3h2P0C090 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.06□□□□□ -0.48
Rc3h2P0C090 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.06□□□□□ -0.48
Rc3h2P0C090 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.06□□□□□ -0.48
Rc3h2P0C090 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rc3h2P0C090 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Gm27438-201ENSMUST00000183480 110 ntBASIC12.06□□□□□ -0.48
Rc3h2P0C090 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Snora73b-201ENSMUST00000083419 205 ntBASIC12.06□□□□□ -0.48
Rc3h2P0C090 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Rc3h2P0C090 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.06□□□□□ -0.48
Rc3h2P0C090 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rc3h2P0C090 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Gm22711-201ENSMUST00000116890 133 ntBASIC12.05□□□□□ -0.48
Rc3h2P0C090 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.05□□□□□ -0.48
Rc3h2P0C090 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Mir8115-201ENSMUST00000184992 119 ntBASIC12.05□□□□□ -0.48
Rc3h2P0C090 Gm43186-201ENSMUST00000198130 824 ntBASIC12.05□□□□□ -0.48
Rc3h2P0C090 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.05□□□□□ -0.48
Rc3h2P0C090 Gm9463-201ENSMUST00000206707 601 ntBASIC12.05□□□□□ -0.48
Rc3h2P0C090 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.05□□□□□ -0.48
Rc3h2P0C090 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.05□□□□□ -0.48
Rc3h2P0C090 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.05□□□□□ -0.48
Rc3h2P0C090 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.05□□□□□ -0.48
Rc3h2P0C090 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rc3h2P0C090 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rc3h2P0C090 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rc3h2P0C090 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rc3h2P0C090 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rc3h2P0C090 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rc3h2P0C090 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.04□□□□□ -0.48
Rc3h2P0C090 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rc3h2P0C090 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms