Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.96□□□□□ -0.49
Hoxb3P09026 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC11.96□□□□□ -0.49
Hoxb3P09026 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.96□□□□□ -0.49
Hoxb3P09026 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.96□□□□□ -0.49
Hoxb3P09026 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Hoxb3P09026 Gm25063-201ENSMUST00000104666 94 ntBASIC11.96□□□□□ -0.49
Hoxb3P09026 Gm12073-201ENSMUST00000117382 524 ntBASIC11.96□□□□□ -0.49
Hoxb3P09026 Gm12712-201ENSMUST00000120676 801 ntBASIC11.96□□□□□ -0.49
Hoxb3P09026 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.96□□□□□ -0.49
Hoxb3P09026 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.96□□□□□ -0.49
Hoxb3P09026 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Hoxb3P09026 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC11.96□□□□□ -0.49
Hoxb3P09026 Gm2474-201ENSMUST00000195162 559 ntBASIC11.96□□□□□ -0.49
Hoxb3P09026 Gm5100-201ENSMUST00000195631 589 ntBASIC11.96□□□□□ -0.49
Hoxb3P09026 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.96□□□□□ -0.49
Hoxb3P09026 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Gm43520-201ENSMUST00000197996 164 ntBASIC11.96□□□□□ -0.49
Hoxb3P09026 Gm44353-201ENSMUST00000200618 138 ntBASIC11.96□□□□□ -0.49
Hoxb3P09026 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC11.96□□□□□ -0.49
Hoxb3P09026 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.96□□□□□ -0.49
Hoxb3P09026 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Hoxb3P09026 CT025526.1-201ENSMUST00000217327 267 ntBASIC11.96□□□□□ -0.49
Hoxb3P09026 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.96□□□□□ -0.49
Hoxb3P09026 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Hoxb3P09026 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.96□□□□□ -0.49
Hoxb3P09026 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Hoxb3P09026 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.96□□□□□ -0.5
Hoxb3P09026 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxb3P09026 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxb3P09026 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxb3P09026 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxb3P09026 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxb3P09026 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hoxb3P09026 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.96□□□□□ -0.5
Hoxb3P09026 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.96□□□□□ -0.5
Hoxb3P09026 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.96□□□□□ -0.5
Hoxb3P09026 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.95□□□□□ -0.5
Hoxb3P09026 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Hoxb3P09026 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Hoxb3P09026 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Hoxb3P09026 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Hoxb3P09026 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm23596-201ENSMUST00000104304 132 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm11578-201ENSMUST00000118530 459 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm12164-201ENSMUST00000121695 551 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm25843-201ENSMUST00000122582 314 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.95□□□□□ -0.5
Hoxb3P09026 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm25881-201ENSMUST00000157783 103 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Mir7677-201ENSMUST00000184226 67 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm10774-201ENSMUST00000188689 204 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm37852-201ENSMUST00000193027 350 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm17831-201ENSMUST00000205579 900 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm18256-201ENSMUST00000209087 907 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Hoxb3P09026 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Hoxb3P09026 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Hoxb3P09026 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Hoxb3P09026 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms