Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 Gm12015-201ENSMUST00000117065 843 ntBASIC11.6□□□□□ -0.55
Apoa4P06728 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.6□□□□□ -0.55
Apoa4P06728 Gm11439-201ENSMUST00000118598 409 ntBASIC11.6□□□□□ -0.55
Apoa4P06728 Gm12164-201ENSMUST00000121695 551 ntBASIC11.6□□□□□ -0.55
Apoa4P06728 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Apoa4P06728 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Apoa4P06728 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Apoa4P06728 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.6□□□□□ -0.55
Apoa4P06728 Gm3096-201ENSMUST00000185770 364 ntBASIC11.6□□□□□ -0.55
Apoa4P06728 Gm9230-201ENSMUST00000188228 532 ntBASIC11.6□□□□□ -0.55
Apoa4P06728 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.6□□□□□ -0.55
Apoa4P06728 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.6□□□□□ -0.55
Apoa4P06728 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.6□□□□□ -0.55
Apoa4P06728 Gm31256-201ENSMUST00000194705 506 ntBASIC11.6□□□□□ -0.55
Apoa4P06728 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.6□□□□□ -0.55
Apoa4P06728 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.6□□□□□ -0.55
Apoa4P06728 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Apoa4P06728 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.6□□□□□ -0.55
Apoa4P06728 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Apoa4P06728 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.6□□□□□ -0.55
Apoa4P06728 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Apoa4P06728 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.6□□□□□ -0.55
Apoa4P06728 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Apoa4P06728 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Apoa4P06728 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.6□□□□□ -0.55
Apoa4P06728 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Apoa4P06728 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Apoa4P06728 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Apoa4P06728 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Apoa4P06728 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Apoa4P06728 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Apoa4P06728 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Apoa4P06728 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Apoa4P06728 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Apoa4P06728 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.59□□□□□ -0.55
Apoa4P06728 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
Apoa4P06728 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
Apoa4P06728 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.59□□□□□ -0.55
Apoa4P06728 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.59□□□□□ -0.55
Apoa4P06728 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.59□□□□□ -0.55
Apoa4P06728 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.59□□□□□ -0.55
Apoa4P06728 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Apoa4P06728 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.59□□□□□ -0.55
Apoa4P06728 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.59□□□□□ -0.55
Apoa4P06728 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Apoa4P06728 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Apoa4P06728 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Apoa4P06728 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Apoa4P06728 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Apoa4P06728 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Apoa4P06728 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Apoa4P06728 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Apoa4P06728 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Apoa4P06728 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Apoa4P06728 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Apoa4P06728 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Apoa4P06728 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Apoa4P06728 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.58□□□□□ -0.56
Apoa4P06728 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.58□□□□□ -0.56
Apoa4P06728 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Apoa4P06728 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Apoa4P06728 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.58□□□□□ -0.56
Apoa4P06728 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.58□□□□□ -0.56
Apoa4P06728 Gm14644-201ENSMUST00000116671 647 ntBASIC11.58□□□□□ -0.56
Apoa4P06728 Gm11930-201ENSMUST00000117788 190 ntBASIC11.58□□□□□ -0.56
Apoa4P06728 Gm7722-201ENSMUST00000120646 741 ntBASIC11.58□□□□□ -0.56
Apoa4P06728 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Apoa4P06728 Gm2991-201ENSMUST00000173338 480 ntBASIC11.58□□□□□ -0.56
Apoa4P06728 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Apoa4P06728 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Apoa4P06728 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Apoa4P06728 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Apoa4P06728 Gm6621-201ENSMUST00000193251 772 ntBASIC11.58□□□□□ -0.56
Apoa4P06728 Gm18893-201ENSMUST00000198416 943 ntBASIC11.58□□□□□ -0.56
Apoa4P06728 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.58□□□□□ -0.56
Apoa4P06728 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Apoa4P06728 Gm8712-201ENSMUST00000221090 701 ntBASIC11.58□□□□□ -0.56
Apoa4P06728 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms