Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm45118-201ENSMUST00000208928 825 ntBASIC9.93□□□□□ -0.82
Hoxa3P02831 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.93□□□□□ -0.82
Hoxa3P02831 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm14267-206ENSMUST00000226870 1209 ntBASIC9.93□□□□□ -0.82
Hoxa3P02831 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm21811-201ENSMUST00000096485 930 ntBASIC9.93□□□□□ -0.82
Hoxa3P02831 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Hoxa3P02831 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Hoxa3P02831 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.92□□□□□ -0.82
Hoxa3P02831 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Hoxa3P02831 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Hoxa3P02831 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.92□□□□□ -0.82
Hoxa3P02831 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Hoxa3P02831 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.92□□□□□ -0.82
Hoxa3P02831 Gm23912-201ENSMUST00000104687 87 ntBASIC9.92□□□□□ -0.82
Hoxa3P02831 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Gm9062-201ENSMUST00000117712 727 ntBASIC9.92□□□□□ -0.82
Hoxa3P02831 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.92□□□□□ -0.82
Hoxa3P02831 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.92□□□□□ -0.82
Hoxa3P02831 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.92□□□□□ -0.82
Hoxa3P02831 Gm5733-201ENSMUST00000190232 939 ntBASIC9.92□□□□□ -0.82
Hoxa3P02831 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.92□□□□□ -0.82
Hoxa3P02831 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.92□□□□□ -0.82
Hoxa3P02831 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.92□□□□□ -0.82
Hoxa3P02831 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.92□□□□□ -0.82
Hoxa3P02831 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Gm26448-201ENSMUST00000082446 203 ntBASIC9.92□□□□□ -0.82
Hoxa3P02831 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Hoxa3P02831 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.92□□□□□ -0.82
Hoxa3P02831 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Hoxa3P02831 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
Hoxa3P02831 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Hoxa3P02831 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.92□□□□□ -0.82
Hoxa3P02831 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Hoxa3P02831 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxa3P02831 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms