Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igh-VJ558P01758 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Gm15711-201ENSMUST00000118889 535 ntBASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Gm26083-201ENSMUST00000157904 193 ntBASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Gm3332-201ENSMUST00000189337 928 ntBASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Rps4l-202ENSMUST00000204242 789 ntBASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Gm7940-201ENSMUST00000218195 769 ntBASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Igh-VJ558P01758 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.16□□□□□ -0.78
Igh-VJ558P01758 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Gm23596-201ENSMUST00000104304 132 ntBASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Gm12857-201ENSMUST00000117678 592 ntBASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Gm27530-201ENSMUST00000184096 98 ntBASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Gm807-202ENSMUST00000224929 408 ntBASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igh-VJ558P01758 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms