Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Gm11511-201ENSMUST00000118146 540 ntBASIC11.11□□□□□ -0.63
Matn4O89029 Gm13786-201ENSMUST00000122371 333 ntBASIC11.11□□□□□ -0.63
Matn4O89029 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.11□□□□□ -0.63
Matn4O89029 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.11□□□□□ -0.63
Matn4O89029 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Matn4O89029 Gm38002-201ENSMUST00000193255 180 ntBASIC11.11□□□□□ -0.63
Matn4O89029 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.11□□□□□ -0.63
Matn4O89029 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.11□□□□□ -0.63
Matn4O89029 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Gm19309-201ENSMUST00000218295 205 ntBASIC11.11□□□□□ -0.63
Matn4O89029 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.11□□□□□ -0.63
Matn4O89029 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Gm10312-201ENSMUST00000078515 489 ntBASIC11.11□□□□□ -0.63
Matn4O89029 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Matn4O89029 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Matn4O89029 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.11□□□□□ -0.63
Matn4O89029 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.11□□□□□ -0.63
Matn4O89029 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Matn4O89029 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.1□□□□□ -0.63
Matn4O89029 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Matn4O89029 Gm15004-201ENSMUST00000119192 630 ntBASIC11.1□□□□□ -0.63
Matn4O89029 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.1□□□□□ -0.63
Matn4O89029 Gm11793-201ENSMUST00000120433 981 ntBASIC11.1□□□□□ -0.63
Matn4O89029 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.1□□□□□ -0.63
Matn4O89029 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.1□□□□□ -0.63
Matn4O89029 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Gm8956-201ENSMUST00000203939 825 ntBASIC11.1□□□□□ -0.63
Matn4O89029 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Matn4O89029 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.1□□□□□ -0.63
Matn4O89029 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.1□□□□□ -0.63
Matn4O89029 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.1□□□□□ -0.63
Matn4O89029 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Matn4O89029 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.1□□□□□ -0.63
Matn4O89029 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.1□□□□□ -0.63
Matn4O89029 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.1□□□□□ -0.63
Matn4O89029 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.1□□□□□ -0.63
Matn4O89029 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.1□□□□□ -0.63
Matn4O89029 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Matn4O89029 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.1□□□□□ -0.63
Matn4O89029 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.09□□□□□ -0.63
Matn4O89029 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.09□□□□□ -0.63
Matn4O89029 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Matn4O89029 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.09□□□□□ -0.63
Matn4O89029 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Matn4O89029 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Matn4O89029 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Matn4O89029 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Matn4O89029 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Matn4O89029 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Matn4O89029 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Matn4O89029 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.09□□□□□ -0.63
Matn4O89029 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.09□□□□□ -0.63
Matn4O89029 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Matn4O89029 Gm5187-201ENSMUST00000117317 991 ntBASIC11.09□□□□□ -0.63
Matn4O89029 Gm13297-201ENSMUST00000120205 934 ntBASIC11.09□□□□□ -0.63
Matn4O89029 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.09□□□□□ -0.63
Matn4O89029 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Matn4O89029 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Matn4O89029 Snora78-201ENSMUST00000158630 128 ntBASIC11.09□□□□□ -0.63
Matn4O89029 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Matn4O89029 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Matn4O89029 Gm19187-201ENSMUST00000206781 892 ntBASIC11.09□□□□□ -0.63
Matn4O89029 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms