Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Hcn1O88704 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.33□□□□□ -0.6
Hcn1O88704 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Gm14644-201ENSMUST00000116671 647 ntBASIC11.33□□□□□ -0.6
Hcn1O88704 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.33□□□□□ -0.6
Hcn1O88704 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.33□□□□□ -0.6
Hcn1O88704 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Hcn1O88704 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.33□□□□□ -0.6
Hcn1O88704 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Hcn1O88704 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.33□□□□□ -0.6
Hcn1O88704 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.33□□□□□ -0.6
Hcn1O88704 Gm19187-201ENSMUST00000206781 892 ntBASIC11.33□□□□□ -0.6
Hcn1O88704 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.33□□□□□ -0.6
Hcn1O88704 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.33□□□□□ -0.6
Hcn1O88704 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.33□□□□□ -0.6
Hcn1O88704 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.33□□□□□ -0.6
Hcn1O88704 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hcn1O88704 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.33□□□□□ -0.6
Hcn1O88704 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hcn1O88704 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.32□□□□□ -0.6
Hcn1O88704 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.32□□□□□ -0.6
Hcn1O88704 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.32□□□□□ -0.6
Hcn1O88704 BC043934-202ENSMUST00000185694 2356 ntBASIC11.32□□□□□ -0.6
Hcn1O88704 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hcn1O88704 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hcn1O88704 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Hcn1O88704 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hcn1O88704 Gm14130-201ENSMUST00000118417 987 ntBASIC11.32□□□□□ -0.6
Hcn1O88704 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.32□□□□□ -0.6
Hcn1O88704 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.32□□□□□ -0.6
Hcn1O88704 Gm26361-201ENSMUST00000158868 186 ntBASIC11.32□□□□□ -0.6
Hcn1O88704 Gm2383-201ENSMUST00000181461 807 ntBASIC11.32□□□□□ -0.6
Hcn1O88704 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.32□□□□□ -0.6
Hcn1O88704 Gm45598-202ENSMUST00000210719 986 ntBASIC11.32□□□□□ -0.6
Hcn1O88704 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.32□□□□□ -0.6
Hcn1O88704 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.32□□□□□ -0.6
Hcn1O88704 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Hcn1O88704 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.32□□□□□ -0.6
Hcn1O88704 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.32□□□□□ -0.6
Hcn1O88704 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.32□□□□□ -0.6
Hcn1O88704 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hcn1O88704 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.32□□□□□ -0.6
Hcn1O88704 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hcn1O88704 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.31□□□□□ -0.6
Hcn1O88704 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.31□□□□□ -0.6
Hcn1O88704 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms