Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.5□□□□□ -0.41
Itgb3O54890 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
Itgb3O54890 Mir6546-201ENSMUST00000184460 62 ntBASIC12.5□□□□□ -0.41
Itgb3O54890 Gm29499-201ENSMUST00000189151 486 ntBASIC12.5□□□□□ -0.41
Itgb3O54890 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Gm28329-201ENSMUST00000191208 689 ntBASIC12.5□□□□□ -0.41
Itgb3O54890 Gm29171-201ENSMUST00000191397 486 ntBASIC12.5□□□□□ -0.41
Itgb3O54890 Gm38151-201ENSMUST00000195085 289 ntBASIC12.5□□□□□ -0.41
Itgb3O54890 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.5□□□□□ -0.41
Itgb3O54890 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.5□□□□□ -0.41
Itgb3O54890 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.5□□□□□ -0.41
Itgb3O54890 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.5□□□□□ -0.41
Itgb3O54890 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.5□□□□□ -0.41
Itgb3O54890 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.5□□□□□ -0.41
Itgb3O54890 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Itgb3O54890 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.49□□□□□ -0.41
Itgb3O54890 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Itgb3O54890 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Itgb3O54890 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.49□□□□□ -0.41
Itgb3O54890 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Itgb3O54890 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Itgb3O54890 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.49□□□□□ -0.41
Itgb3O54890 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.49□□□□□ -0.41
Itgb3O54890 Gm19891-201ENSMUST00000189771 303 ntBASIC12.49□□□□□ -0.41
Itgb3O54890 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.49□□□□□ -0.41
Itgb3O54890 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.49□□□□□ -0.41
Itgb3O54890 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.49□□□□□ -0.41
Itgb3O54890 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.49□□□□□ -0.41
Itgb3O54890 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Itgb3O54890 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.49□□□□□ -0.41
Itgb3O54890 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.49□□□□□ -0.41
Itgb3O54890 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Itgb3O54890 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.49□□□□□ -0.41
Itgb3O54890 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.49□□□□□ -0.41
Itgb3O54890 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Itgb3O54890 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Itgb3O54890 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Itgb3O54890 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Itgb3O54890 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Itgb3O54890 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Itgb3O54890 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Itgb3O54890 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Itgb3O54890 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Itgb3O54890 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Itgb3O54890 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Itgb3O54890 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.48□□□□□ -0.41
Itgb3O54890 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Itgb3O54890 Gm14263-201ENSMUST00000117955 746 ntBASIC12.48□□□□□ -0.41
Itgb3O54890 Gm15573-201ENSMUST00000119487 540 ntBASIC12.48□□□□□ -0.41
Itgb3O54890 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.48□□□□□ -0.41
Itgb3O54890 Gm22144-201ENSMUST00000157402 102 ntBASIC12.48□□□□□ -0.41
Itgb3O54890 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.48□□□□□ -0.41
Itgb3O54890 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Itgb3O54890 Gm9540-201ENSMUST00000188230 478 ntBASIC12.48□□□□□ -0.41
Itgb3O54890 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.48□□□□□ -0.41
Itgb3O54890 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Itgb3O54890 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.48□□□□□ -0.41
Itgb3O54890 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.48□□□□□ -0.41
Itgb3O54890 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Itgb3O54890 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Itgb3O54890 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Itgb3O54890 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.48□□□□□ -0.41
Itgb3O54890 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Itgb3O54890 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Itgb3O54890 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms