Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Slc1a6O35544 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Slc1a6O35544 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Slc1a6O35544 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
Slc1a6O35544 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.6□□□□□ -0.55
Slc1a6O35544 Gm11478-201ENSMUST00000117851 599 ntBASIC11.6□□□□□ -0.55
Slc1a6O35544 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.6□□□□□ -0.55
Slc1a6O35544 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.6□□□□□ -0.55
Slc1a6O35544 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.6□□□□□ -0.55
Slc1a6O35544 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Slc1a6O35544 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Slc1a6O35544 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Slc1a6O35544 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Slc1a6O35544 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Slc1a6O35544 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Slc1a6O35544 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Slc1a6O35544 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.59□□□□□ -0.55
Slc1a6O35544 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.59□□□□□ -0.55
Slc1a6O35544 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.59□□□□□ -0.55
Slc1a6O35544 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.59□□□□□ -0.55
Slc1a6O35544 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Slc1a6O35544 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.59□□□□□ -0.55
Slc1a6O35544 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.59□□□□□ -0.55
Slc1a6O35544 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.59□□□□□ -0.55
Slc1a6O35544 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.59□□□□□ -0.55
Slc1a6O35544 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.59□□□□□ -0.55
Slc1a6O35544 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.59□□□□□ -0.55
Slc1a6O35544 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.59□□□□□ -0.55
Slc1a6O35544 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Slc1a6O35544 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.59□□□□□ -0.55
Slc1a6O35544 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.59□□□□□ -0.55
Slc1a6O35544 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.59□□□□□ -0.55
Slc1a6O35544 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.59□□□□□ -0.55
Slc1a6O35544 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.59□□□□□ -0.55
Slc1a6O35544 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc1a6O35544 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Slc1a6O35544 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.59□□□□□ -0.55
Slc1a6O35544 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Slc1a6O35544 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.58□□□□□ -0.55
Slc1a6O35544 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Slc1a6O35544 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Slc1a6O35544 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.58□□□□□ -0.56
Slc1a6O35544 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.58□□□□□ -0.56
Slc1a6O35544 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc1a6O35544 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Slc1a6O35544 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Slc1a6O35544 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Slc1a6O35544 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.58□□□□□ -0.56
Slc1a6O35544 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.58□□□□□ -0.56
Slc1a6O35544 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc1a6O35544 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc1a6O35544 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms