Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr1aO35134 Gm11957-201ENSMUST00000118304 779 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm23400-201ENSMUST00000174994 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm26463-201ENSMUST00000175065 101 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm24332-201ENSMUST00000175102 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm25959-201ENSMUST00000175112 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm22475-201ENSMUST00000175169 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm22903-201ENSMUST00000175193 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm25070-201ENSMUST00000175237 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm24159-201ENSMUST00000175264 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm25299-201ENSMUST00000175283 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm23798-201ENSMUST00000175560 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm23802-201ENSMUST00000175565 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm25708-201ENSMUST00000177687 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Polr1aO35134 Gm24370-201ENSMUST00000178007 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm23049-201ENSMUST00000178068 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm28019-201ENSMUST00000178138 101 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm25571-201ENSMUST00000178322 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm25355-201ENSMUST00000178456 101 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm24975-201ENSMUST00000178492 101 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm23189-201ENSMUST00000178954 102 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm25100-201ENSMUST00000179750 101 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm23064-201ENSMUST00000179866 101 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Gm9162-201ENSMUST00000182081 991 ntBASIC17.82■□□□□ 0.44
Polr1aO35134 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr1aO35134 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr1aO35134 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr1aO35134 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Polr1aO35134 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Polr1aO35134 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr1aO35134 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC17.82■□□□□ 0.44
Polr1aO35134 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Polr1aO35134 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr1aO35134 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr1aO35134 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Polr1aO35134 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Polr1aO35134 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Polr1aO35134 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Polr1aO35134 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Polr1aO35134 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC17.81■□□□□ 0.44
Polr1aO35134 Gm25569-201ENSMUST00000157175 131 ntBASIC17.81■□□□□ 0.44
Polr1aO35134 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 BC106175-202ENSMUST00000219344 1213 ntBASIC17.81■□□□□ 0.44
Polr1aO35134 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 Gm19680-201ENSMUST00000095050 1513 ntBASIC17.81■□□□□ 0.44
Polr1aO35134 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Polr1aO35134 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Polr1aO35134 Gm22937-201ENSMUST00000103954 131 ntBASIC17.81■□□□□ 0.44
Polr1aO35134 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC17.81■□□□□ 0.44
Polr1aO35134 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Polr1aO35134 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Polr1aO35134 Gm19927-201ENSMUST00000185792 781 ntBASIC17.81■□□□□ 0.44
Polr1aO35134 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC17.81■□□□□ 0.44
Polr1aO35134 Gm9353-201ENSMUST00000200472 604 ntBASIC17.81■□□□□ 0.44
Polr1aO35134 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC17.81■□□□□ 0.44
Polr1aO35134 Gm7589-201ENSMUST00000085631 534 ntBASIC17.81■□□□□ 0.44
Polr1aO35134 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Polr1aO35134 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Polr1aO35134 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Polr1aO35134 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC17.8■□□□□ 0.44
Polr1aO35134 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC17.8■□□□□ 0.44
Polr1aO35134 Gm37782-201ENSMUST00000194879 678 ntBASIC17.8■□□□□ 0.44
Polr1aO35134 AC102847.1-202ENSMUST00000226313 1245 ntBASIC17.8■□□□□ 0.44
Polr1aO35134 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Gm25580-201ENSMUST00000083409 327 ntBASIC17.8■□□□□ 0.44
Polr1aO35134 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC17.8■□□□□ 0.44
Polr1aO35134 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.8■□□□□ 0.44
Polr1aO35134 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Polr1aO35134 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Polr1aO35134 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms