Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Gm6024-201ENSMUST00000117850 1558 ntBASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Gm14497-201ENSMUST00000119537 580 ntBASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Gm33366-201ENSMUST00000195583 3827 ntBASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Pcf11G3X9Z4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Gm37651-201ENSMUST00000194679 1494 ntBASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Gm14398-201ENSMUST00000117287 1073 ntBASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Gm11619-201ENSMUST00000117474 237 ntBASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Gm34379-201ENSMUST00000195036 290 ntBASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Gm42430-201ENSMUST00000197209 616 ntBASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Nudt13-207ENSMUST00000224311 1574 ntBASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcf11G3X9Z4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Gm5740-201ENSMUST00000211003 1857 ntBASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Gm11560-201ENSMUST00000117567 948 ntBASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Mrip-ps-201ENSMUST00000184613 940 ntBASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Gm18035-201ENSMUST00000211962 589 ntBASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 AC122024.3-201ENSMUST00000217719 294 ntBASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Id2-203ENSMUST00000222667 958 ntBASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Gm25201-201ENSMUST00000083093 170 ntBASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Pcf11G3X9Z4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Gm6157-201ENSMUST00000199935 1897 ntBASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcf11G3X9Z4 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 236.5 ms