Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Pcdh9F8VPK8 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Gm15004-201ENSMUST00000119192 630 ntBASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Gm14381-201ENSMUST00000122105 414 ntBASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Gm8885-201ENSMUST00000189382 598 ntBASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh9F8VPK8 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Gm24255-201ENSMUST00000104481 128 ntBASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Gm14109-201ENSMUST00000118814 309 ntBASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Gm7783-201ENSMUST00000204795 781 ntBASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Gzmn-202ENSMUST00000225535 989 ntBASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh9F8VPK8 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms