Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.13□□□□□ -0.47
Atf6F6VAN0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Gm25668-201ENSMUST00000157700 129 ntBASIC12.13□□□□□ -0.47
Atf6F6VAN0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.13□□□□□ -0.47
Atf6F6VAN0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Atf6F6VAN0 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf6F6VAN0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Gm22133-201ENSMUST00000102082 109 ntBASIC12.12□□□□□ -0.47
Atf6F6VAN0 Gm26286-201ENSMUST00000104166 134 ntBASIC12.12□□□□□ -0.47
Atf6F6VAN0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Gm15004-201ENSMUST00000119192 630 ntBASIC12.12□□□□□ -0.47
Atf6F6VAN0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Gm44262-201ENSMUST00000204969 372 ntBASIC12.12□□□□□ -0.47
Atf6F6VAN0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.12□□□□□ -0.47
Atf6F6VAN0 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.12□□□□□ -0.47
Atf6F6VAN0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Atf6F6VAN0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.11□□□□□ -0.47
Atf6F6VAN0 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.11□□□□□ -0.47
Atf6F6VAN0 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.11□□□□□ -0.47
Atf6F6VAN0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Gm11700-201ENSMUST00000119409 403 ntBASIC12.11□□□□□ -0.47
Atf6F6VAN0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms