Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn2B2RVW2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn2B2RVW2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.62□□□□□ -0.23
Clrn2B2RVW2 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Gm42816-201ENSMUST00000198433 325 ntBASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Gm9111-201ENSMUST00000219394 709 ntBASIC13.62□□□□□ -0.23
Clrn2B2RVW2 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Gm4978-201ENSMUST00000071565 801 ntBASIC13.62□□□□□ -0.23
Clrn2B2RVW2 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.62□□□□□ -0.23
Clrn2B2RVW2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn2B2RVW2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm12247-201ENSMUST00000117585 670 ntBASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm14892-201ENSMUST00000117636 267 ntBASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm13022-201ENSMUST00000121181 285 ntBASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm10169-201ENSMUST00000121822 348 ntBASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm6114-201ENSMUST00000182472 968 ntBASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm9135-201ENSMUST00000182963 990 ntBASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Mir8093-201ENSMUST00000185043 137 ntBASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm3726-201ENSMUST00000203110 785 ntBASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.61□□□□□ -0.23
Clrn2B2RVW2 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm16380-201ENSMUST00000077997 478 ntBASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm25201-201ENSMUST00000083093 170 ntBASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn2B2RVW2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms