Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Gm12036-201ENSMUST00000120008 530 ntBASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Gm26083-201ENSMUST00000157904 193 ntBASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Gm5706-201ENSMUST00000181525 993 ntBASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Mir6420-201ENSMUST00000185032 102 ntBASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.92□□□□□ -0.66
ClcnkaQ9WUB7 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms