Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm19080-201ENSMUST00000196082 550 ntBASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Gm43037-201ENSMUST00000196808 250 ntBASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Gm5706-201ENSMUST00000181525 993 ntBASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Gm40332-201ENSMUST00000199847 938 ntBASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Gm9257-201ENSMUST00000221254 232 ntBASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.05□□□□□ -0.32
Prpf40aQ9R1C7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gm13996-201ENSMUST00000118456 430 ntBASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gm15968-201ENSMUST00000119342 1168 ntBASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gm15610-201ENSMUST00000120584 195 ntBASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gm7722-201ENSMUST00000120646 741 ntBASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gm23757-201ENSMUST00000158353 100 ntBASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gm26226-201ENSMUST00000082509 116 ntBASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms