Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim42Q9D2H5 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.88□□□□□ -0.51
Trim42Q9D2H5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Gm11803-201ENSMUST00000119966 444 ntBASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Gm45668-201ENSMUST00000211271 493 ntBASIC11.88□□□□□ -0.51
Trim42Q9D2H5 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim42Q9D2H5 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Gm11439-201ENSMUST00000118598 409 ntBASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Gm36991-201ENSMUST00000191800 648 ntBASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Gm5781-201ENSMUST00000219792 443 ntBASIC11.87□□□□□ -0.51
Trim42Q9D2H5 AC106830.1-201ENSMUST00000228032 1003 ntBASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Gm8420-201ENSMUST00000097103 598 ntBASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim42Q9D2H5 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms