Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.93□□□□□ -0.66
Trim13Q9CYB0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Gm4984-201ENSMUST00000115987 360 ntBASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Gm12390-201ENSMUST00000117897 397 ntBASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Gm29649-201ENSMUST00000185649 419 ntBASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Gm6091-201ENSMUST00000098307 165 ntBASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.93□□□□□ -0.66
Trim13Q9CYB0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Gm37744-201ENSMUST00000194616 1590 ntBASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Gm15824-201ENSMUST00000119516 955 ntBASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Gm27682-201ENSMUST00000183930 110 ntBASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Gm9136-201ENSMUST00000193368 454 ntBASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim13Q9CYB0 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim13Q9CYB0 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms