Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Gm24845-201ENSMUST00000158034 109 ntBASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Smc1aQ9CU62 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Gm12266-201ENSMUST00000120311 962 ntBASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Gm20426-201ENSMUST00000173657 440 ntBASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Gm28882-201ENSMUST00000185504 314 ntBASIC13.26□□□□□ -0.29
Smc1aQ9CU62 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Gm42599-201ENSMUST00000201308 469 ntBASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Gm17812-201ENSMUST00000204935 318 ntBASIC13.26□□□□□ -0.29
Smc1aQ9CU62 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.26□□□□□ -0.29
Smc1aQ9CU62 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Gm26035-201ENSMUST00000083065 308 ntBASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1aQ9CU62 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Gm12015-201ENSMUST00000117065 843 ntBASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Gm17040-202ENSMUST00000170597 889 ntBASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1aQ9CU62 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms