Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.19□□□□□ -0.62
Ska1Q9CPV1 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Ska1Q9CPV1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ska1Q9CPV1 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ska1Q9CPV1 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.19□□□□□ -0.62
Ska1Q9CPV1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ska1Q9CPV1 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Ska1Q9CPV1 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ska1Q9CPV1 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ska1Q9CPV1 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ska1Q9CPV1 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ska1Q9CPV1 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ska1Q9CPV1 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ska1Q9CPV1 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ska1Q9CPV1 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Gm14999-201ENSMUST00000121039 624 ntBASIC11.18□□□□□ -0.62
Ska1Q9CPV1 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.18□□□□□ -0.62
Ska1Q9CPV1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Gm9136-201ENSMUST00000193368 454 ntBASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ska1Q9CPV1 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 AC121870.2-201ENSMUST00000214343 1870 ntBASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Gm42693-201ENSMUST00000196779 631 ntBASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ska1Q9CPV1 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms