Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Gm8365-201ENSMUST00000197334 648 ntBASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Gm45219-201ENSMUST00000205602 465 ntBASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Gm6867-201ENSMUST00000219165 425 ntBASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3b1Q99NB9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Gm22920-201ENSMUST00000102175 109 ntBASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Gm14193-201ENSMUST00000105067 153 ntBASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Gm23045-201ENSMUST00000175041 96 ntBASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b1Q99NB9 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Gm2517-201ENSMUST00000215651 348 ntBASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b1Q99NB9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms