Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Gm9192-201ENSMUST00000183221 985 ntBASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Gm43433-201ENSMUST00000196573 481 ntBASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Gm43002-201ENSMUST00000200310 155 ntBASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Olfr284-202ENSMUST00000206647 966 ntBASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Gm18054-201ENSMUST00000207539 555 ntBASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Rgr-203ENSMUST00000225070 4704 ntBASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Gm15547-201ENSMUST00000122152 333 ntBASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Gm30285-201ENSMUST00000214614 422 ntBASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdk5rap3Q99LM2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdk5rap3Q99LM2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk5rap3Q99LM2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk5rap3Q99LM2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.21□□□□□ -0.46
Cdk5rap3Q99LM2 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk5rap3Q99LM2 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms