Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm9257-201ENSMUST00000221254 232 ntBASIC12.47□□□□□ -0.41
Usp11Q99K46 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.47□□□□□ -0.41
Usp11Q99K46 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.47□□□□□ -0.41
Usp11Q99K46 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Usp11Q99K46 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.47□□□□□ -0.41
Usp11Q99K46 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Usp11Q99K46 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.47□□□□□ -0.41
Usp11Q99K46 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.47□□□□□ -0.41
Usp11Q99K46 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Usp11Q99K46 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp11Q99K46 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.46□□□□□ -0.41
Usp11Q99K46 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.46□□□□□ -0.41
Usp11Q99K46 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Usp11Q99K46 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.46□□□□□ -0.41
Usp11Q99K46 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 Gm24830-201ENSMUST00000102024 166 ntBASIC12.46□□□□□ -0.41
Usp11Q99K46 Gm14644-201ENSMUST00000116671 647 ntBASIC12.46□□□□□ -0.41
Usp11Q99K46 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.46□□□□□ -0.41
Usp11Q99K46 Gm25890-201ENSMUST00000177643 165 ntBASIC12.46□□□□□ -0.41
Usp11Q99K46 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.46□□□□□ -0.41
Usp11Q99K46 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.46□□□□□ -0.41
Usp11Q99K46 Gm22614-201ENSMUST00000178300 165 ntBASIC12.46□□□□□ -0.41
Usp11Q99K46 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Usp11Q99K46 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.46□□□□□ -0.41
Usp11Q99K46 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.46□□□□□ -0.41
Usp11Q99K46 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.46□□□□□ -0.41
Usp11Q99K46 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 Gm22042-201ENSMUST00000082989 165 ntBASIC12.46□□□□□ -0.41
Usp11Q99K46 Gm26232-201ENSMUST00000083360 166 ntBASIC12.46□□□□□ -0.41
Usp11Q99K46 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.46□□□□□ -0.41
Usp11Q99K46 Gm26110-201ENSMUST00000083971 165 ntBASIC12.46□□□□□ -0.41
Usp11Q99K46 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp11Q99K46 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp11Q99K46 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Usp11Q99K46 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp11Q99K46 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Usp11Q99K46 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp11Q99K46 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp11Q99K46 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Usp11Q99K46 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Usp11Q99K46 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp11Q99K46 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp11Q99K46 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp11Q99K46 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp11Q99K46 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Usp11Q99K46 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.45□□□□□ -0.42
Usp11Q99K46 Gm6963-201ENSMUST00000147879 379 ntBASIC12.45□□□□□ -0.42
Usp11Q99K46 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Gm5070-201ENSMUST00000177599 862 ntBASIC12.45□□□□□ -0.42
Usp11Q99K46 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.45□□□□□ -0.42
Usp11Q99K46 Gm44967-201ENSMUST00000207047 631 ntBASIC12.45□□□□□ -0.42
Usp11Q99K46 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp11Q99K46 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp11Q99K46 Gm19994-201ENSMUST00000217086 586 ntBASIC12.45□□□□□ -0.42
Usp11Q99K46 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.45□□□□□ -0.42
Usp11Q99K46 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Usp11Q99K46 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Usp11Q99K46 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Usp11Q99K46 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Usp11Q99K46 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms