Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smc1bQ920F6 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.71□□□□□ -0.22
Smc1bQ920F6 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smc1bQ920F6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Gm11246-201ENSMUST00000120880 345 ntBASIC13.7□□□□□ -0.22
Smc1bQ920F6 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.7□□□□□ -0.22
Smc1bQ920F6 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Mir7076-201ENSMUST00000183519 74 ntBASIC13.7□□□□□ -0.22
Smc1bQ920F6 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.7□□□□□ -0.22
Smc1bQ920F6 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Snora73b-201ENSMUST00000083419 205 ntBASIC13.7□□□□□ -0.22
Smc1bQ920F6 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.7□□□□□ -0.22
Smc1bQ920F6 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smc1bQ920F6 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.69□□□□□ -0.22
Smc1bQ920F6 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.69□□□□□ -0.22
Smc1bQ920F6 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.69□□□□□ -0.22
Smc1bQ920F6 Gm8100-201ENSMUST00000182906 988 ntBASIC13.69□□□□□ -0.22
Smc1bQ920F6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Gm3332-201ENSMUST00000189337 928 ntBASIC13.69□□□□□ -0.22
Smc1bQ920F6 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.69□□□□□ -0.22
Smc1bQ920F6 Gm17831-201ENSMUST00000205579 900 ntBASIC13.69□□□□□ -0.22
Smc1bQ920F6 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.69□□□□□ -0.22
Smc1bQ920F6 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.69□□□□□ -0.22
Smc1bQ920F6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.69□□□□□ -0.22
Smc1bQ920F6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc1bQ920F6 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.68□□□□□ -0.22
Smc1bQ920F6 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1bQ920F6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc1bQ920F6 Gm13809-201ENSMUST00000117921 597 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms