Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Gm5714-201ENSMUST00000197343 566 ntBASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb22Q91XZ8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Gm11450-201ENSMUST00000121144 333 ntBASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Mir6927-201ENSMUST00000184494 71 ntBASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Mir8093-201ENSMUST00000185043 137 ntBASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Gm5733-201ENSMUST00000190232 939 ntBASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Gm5982-201ENSMUST00000196234 512 ntBASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Gm45575-201ENSMUST00000210283 548 ntBASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Gm6867-201ENSMUST00000219165 425 ntBASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Gm10288-201ENSMUST00000084614 537 ntBASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb22Q91XZ8 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb22Q91XZ8 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms