Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Mir8109-201ENSMUST00000184375 117 ntBASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdhga3Q91XY5 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Rprl1-201ENSMUST00000158050 327 ntBASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdhga3Q91XY5 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Gm12015-201ENSMUST00000117065 843 ntBASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.57□□□□□ -0.72
Pcdhga3Q91XY5 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms