Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Gm8738-201ENSMUST00000172606 329 ntBASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Gm25857-201ENSMUST00000082788 129 ntBASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Gm22058-201ENSMUST00000083393 310 ntBASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Pcdh18Q8VHR0 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Gm21039-201ENSMUST00000223359 2012 ntBASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Gm13829-201ENSMUST00000119600 138 ntBASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Gm11591-201ENSMUST00000120063 702 ntBASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Gm8018-201ENSMUST00000173536 789 ntBASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Gm44405-201ENSMUST00000198952 126 ntBASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Gm6266-201ENSMUST00000203844 806 ntBASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Gm45925-201ENSMUST00000218882 744 ntBASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Gm45930-201ENSMUST00000221330 292 ntBASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pcdh18Q8VHR0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms