Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps39Q8R5L3 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Gm8956-201ENSMUST00000203939 825 ntBASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps39Q8R5L3 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Vps39Q8R5L3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Vps39Q8R5L3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Gzmn-202ENSMUST00000225535 989 ntBASIC11.83□□□□□ -0.52
Vps39Q8R5L3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps39Q8R5L3 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.83□□□□□ -0.52
Vps39Q8R5L3 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Gm38266-201ENSMUST00000194931 421 ntBASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Rprl1-202ENSMUST00000198476 238 ntBASIC11.82□□□□□ -0.52
Vps39Q8R5L3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 144.6 ms