Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.79□□□□□ -0.2
Vps53Q8CCB4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Gm23912-201ENSMUST00000104687 87 ntBASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Gm28071-201ENSMUST00000190355 478 ntBASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Gm5051-201ENSMUST00000204085 485 ntBASIC13.79□□□□□ -0.2
Vps53Q8CCB4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Gm12380-201ENSMUST00000119012 544 ntBASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Gm15131-201ENSMUST00000119124 595 ntBASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.78□□□□□ -0.2
Vps53Q8CCB4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.77□□□□□ -0.2
Vps53Q8CCB4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vps53Q8CCB4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vps53Q8CCB4 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Vps53Q8CCB4 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vps53Q8CCB4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Gm15711-201ENSMUST00000118889 535 ntBASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Gm11450-201ENSMUST00000121144 333 ntBASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Gm14665-201ENSMUST00000122294 557 ntBASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Gm9230-201ENSMUST00000188228 532 ntBASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.77□□□□□ -0.21
Vps53Q8CCB4 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.77□□□□□ -0.21
Vps53Q8CCB4 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.77□□□□□ -0.21
Vps53Q8CCB4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms