Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Gm11700-201ENSMUST00000119409 403 ntBASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Gm11450-201ENSMUST00000121144 333 ntBASIC15.05■□□□□ -0
Ccdc60Q8C4J0 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Gm8100-201ENSMUST00000182906 988 ntBASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Gm5733-201ENSMUST00000190232 939 ntBASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Gm45575-201ENSMUST00000210283 548 ntBASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
Ccdc60Q8C4J0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Gm14058-201ENSMUST00000116082 735 ntBASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Gm13035-201ENSMUST00000117496 342 ntBASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Gm37466-201ENSMUST00000195692 652 ntBASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Gm2965-201ENSMUST00000198365 343 ntBASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Gm10288-201ENSMUST00000084614 537 ntBASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc60Q8C4J0 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Gm3836-201ENSMUST00000211377 1613 ntBASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Gm8199-201ENSMUST00000121323 823 ntBASIC15.03■□□□□ -0
Ccdc60Q8C4J0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Gm4482-201ENSMUST00000200876 742 ntBASIC15.03■□□□□ -0
Ccdc60Q8C4J0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Gm7848-201ENSMUST00000210739 718 ntBASIC15.03■□□□□ -0
Ccdc60Q8C4J0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms