Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Gm8459-201ENSMUST00000162504 760 ntBASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Mir6927-201ENSMUST00000184494 71 ntBASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Gm38151-201ENSMUST00000195085 289 ntBASIC13.8□□□□□ -0.2
Usp44Q8C2S0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp44Q8C2S0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Gm14058-201ENSMUST00000116082 735 ntBASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Gm11500-201ENSMUST00000118237 601 ntBASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Gm15595-201ENSMUST00000120840 961 ntBASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Gm13263-201ENSMUST00000121271 838 ntBASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.79□□□□□ -0.2
Usp44Q8C2S0 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Usp44Q8C2S0 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Gm24891-201ENSMUST00000104391 136 ntBASIC13.78□□□□□ -0.2
Usp44Q8C2S0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.78□□□□□ -0.2
Usp44Q8C2S0 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms